STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3422cobalamin/Fe3+-siderophore ABC transporter substrate-binding protein. (302 aa)    
Predicted Functional Partners:
ABC3421
cobalamin/Fe3+-siderophore ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.986
ABC3420
cobalamin/Fe3+-siderophore ABC transporter ATP-binding protein.
 
 
 0.967
ABC3419
Conserved hypothetical protein.
 
  
 0.907
ABC3426
Fe3+-siderophore ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.901
ABC3423
Cell surface protein.
 
  
 0.898
ABC3424
Cell surface protein.
 
  
 0.898
ABC1838
Ferric ion ABC transporter permease.
 
 
 0.822
ABC1837
Ferric ion ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.808
fhuC
Ferrichrome ABC transporter ATP-binding protein.
 
 
 0.804
feuC
Fe3+-siderophore ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.803
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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