close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3440Sugar ABC transporter permease. (269 aa)    
Predicted Functional Partners:
ABC3441
Sugar ABC transporter permease.
   0.959
ABC3442
Sugar ABC transporter substrate-binding protein.
 
   0.917
ABC0686
Sugar ABC transporter permease.
   0.856
ABC0317
Sugar ABC transporter permease.
   0.855
ABC3281
Sugar ABC transporter permease.
   0.855
ABC0399
Sugar ABC transporter permease.
   0.852
ABC3124
Sugar ABC transporter permease.
   0.852
ABC3273
Sugar ABC transporter permease.
   0.852
araP
Sugar ABC transporter permease.
   0.852
ABC3775
Sugar ABC transporter permease.
   0.852
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.