STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3446Hypothetical protein. (512 aa)    
Predicted Functional Partners:
ABC1939
Acetyltransferase.
  
     0.730
ABC3376
Conserved hypothetical protein.
  
     0.690
ABC3964
Conserved hypothetical protein.
  
     0.608
ABC3057
Conserved hypothetical protein.
  
     0.597
hemN
Oxygen-independent coproporphyrinogen oxidase III; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
     0.487
ptsG
ABC component PTS system glucose-specific enzyme II.
  
 
 0.460
bglP
A component PTS system glucose-specific enzyme II.
  
 
 0.460
ABC3664
Outer surface protein.
 
    0.436
ABC3375
Two-component sensor histidine kinase.
  
    0.434
ABC3374
Two-component response regulator.
  
     0.406
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.