STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3468Sugar phosphate isomerases/epimerase. (320 aa)    
Predicted Functional Partners:
ABC3283
NADH-dependent dehydrogenase.
    0.815
ABC3472
Oxidoreductase.
 
    0.786
ABC1574
NADH-dependent dehydrogenase.
    0.752
ABC0796
NADH-dependent dyhydrogenase.
 
    0.743
ABC3470
Sugar ABC transporter permease.
  
    0.737
ABC3469
Sugar ABC transporter permease.
  
    0.733
ABC3471
Sugar ABC transporter substrate-binding protein.
 
    0.720
ABC1573
Trehalose utilization protein.
 
     0.714
ABC0577
Oxidoreductase.
 
    0.682
ABC3284
Sugar phosphate isomerases/epimerase.
 
     0.677
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.