STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3470Sugar ABC transporter permease. (311 aa)    
Predicted Functional Partners:
ABC3471
Sugar ABC transporter substrate-binding protein.
  0.993
ABC3469
Sugar ABC transporter permease.
  
0.895
ABC3122
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.853
ABC0400
Sugar ABC transporter permease.
   0.850
ABC0434
Sugar ABC transporter permease.
   0.850
ABC0687
Sugar ABC transporter permease.
   0.850
ABC3272
Sugar ABC transporter permease.
   0.850
ABC3440
Sugar ABC transporter permease.
   0.850
ABC0318
Sugar ABC transporter permease.
   0.849
ABC1215
Sugar ABC transporter permease.
   0.849
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.