STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3471Sugar ABC transporter substrate-binding protein. (407 aa)    
Predicted Functional Partners:
ABC3470
Sugar ABC transporter permease.
 
  0.993
ABC3469
Sugar ABC transporter permease.
 
   0.943
ABC0387
Lactose ABC transporter permease.
 
   0.777
ABC3281
Sugar ABC transporter permease.
 
   0.773
araP
Sugar ABC transporter permease.
 
   0.768
ABC0399
Sugar ABC transporter permease.
 
   0.765
ABC3584
Sugar ABC transporter permease.
 
   0.761
ABC0386
Lactose ABC transporter permease.
 
   0.759
ABC0317
Sugar ABC transporter permease.
 
   0.756
ABC0395
Lactose ABC transporter permease.
 
   0.755
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.