STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3493Spore germination protein KC. (373 aa)    
Predicted Functional Partners:
ABC3492
Spore germination protein KB.
 
  
 0.957
ABC3491
Spore germination protein KA.
 
  
 0.926
gerAB
Spore germination protein.
 
  
 0.737
ABC2022
Spore germination protein.
 
  
 0.729
gerAC
Spore germination protein.
  
   
 0.727
ABC3836
Spore germination protein.
 
  
 0.704
ABC2004
Spore germination protein.
 
  
 0.645
ABC2021
Spore germination protein.
 
  
 0.643
ABC3703
Spore germination protein.
 
  
 0.641
ABC2003
Sopre germination protein.
 
  
 0.595
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.