msmE protein (Bacillus clausii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

msmE

Sugar ABC transporter substrate-binding protein. (453 aa)

Predicted Functional Partners:

ABC3498

0.989

ABC3497

0.987

ABC0436

0.914

msmX

0.905

ABC3122

0.905

ABC0434

0.889

ABC0435

0.875

ABC3118

0.565

ABC0662

0.554

ABC0341

0.547

Your Current Organism:

Bacillus clausii

NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABC0341	ABC0434	ABC0341	ABC0434	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease.	0.736
ABC0341	ABC0435	ABC0341	ABC0435	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease.	0.775
ABC0341	ABC0436	ABC0341	ABC0436	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Sugar ABC transporter substrate-binding protein.	0.547
ABC0341	ABC0662	ABC0341	ABC0662	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease.	0.605
ABC0341	ABC3118	ABC0341	ABC3118	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease.	0.440
ABC0341	ABC3122	ABC0341	ABC3122	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.582
ABC0341	ABC3497	ABC0341	ABC3497	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease.	0.582
ABC0341	ABC3498	ABC0341	ABC3498	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease.	0.543
ABC0341	msmE	ABC0341	ABC3496	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Sugar ABC transporter substrate-binding protein.	0.547
ABC0341	msmX	ABC0341	ABC1514	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.587
ABC0434	ABC0341	ABC0434	ABC0341	Sugar ABC transporter permease.	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.736
ABC0434	ABC0435	ABC0434	ABC0435	Sugar ABC transporter permease.	Sugar ABC transporter permease.	0.994
ABC0434	ABC0436	ABC0434	ABC0436	Sugar ABC transporter permease.	Sugar ABC transporter substrate-binding protein.	0.974
ABC0434	ABC3122	ABC0434	ABC3122	Sugar ABC transporter permease.	Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.966
ABC0434	ABC3497	ABC0434	ABC3497	Sugar ABC transporter permease.	Sugar ABC transporter permease.	0.962
ABC0434	ABC3498	ABC0434	ABC3498	Sugar ABC transporter permease.	Sugar ABC transporter permease.	0.918
ABC0434	msmE	ABC0434	ABC3496	Sugar ABC transporter permease.	Sugar ABC transporter substrate-binding protein.	0.889
ABC0434	msmX	ABC0434	ABC1514	Sugar ABC transporter permease.	Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.964
ABC0435	ABC0341	ABC0435	ABC0341	Sugar ABC transporter permease.	Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.775
ABC0435	ABC0434	ABC0435	ABC0434	Sugar ABC transporter permease.	Sugar ABC transporter permease.	0.994