STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3501Conserved hypothetical protein. (706 aa)    
Predicted Functional Partners:
ABC3503
B component PTS sysytem mannitol-specific enzyme II.
 
  
 0.957
ABC3504
Conserved hypothetical protein.
 
  
 0.937
ABC0885
B component PTS system mannitol/fructose-specific enzyme II.
 
  
 0.822
ABC0947
Conserved hypothetical protein.
 
  
 0.819
ABC0886
C component PTS system mannitol/fructose-specific enzyme II.
 
  
 0.818
ABC1105
C component PTS sysytem mannitol-specific enzyme II.
 
  
 0.818
ABC1104
B component PTS sysytem mannitol-specific enzyme II.
 
  
 0.815
ABC3502
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.
     
 0.784
ABC2929
BC component PTS system mannitol-permease II.
 
  
 0.758
ABC2927
A component PTS system mannitol-permease II.
 
  
 0.749
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.