STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3503B component PTS sysytem mannitol-specific enzyme II. (99 aa)    
Predicted Functional Partners:
ABC3504
Conserved hypothetical protein.
 
 
 0.994
ABC0886
C component PTS system mannitol/fructose-specific enzyme II.
 
 
 0.984
ABC0947
Conserved hypothetical protein.
 
 
 0.984
ABC1105
C component PTS sysytem mannitol-specific enzyme II.
 
 
 0.984
ABC0884
A component PTS system mannitol/fructose-specific enzyme II.
 
 
 0.978
ABC0946
Conserved hypothetical protein.
  
  
  0.969
ABC3501
Conserved hypothetical protein.
 
  
 0.957
ABC0885
B component PTS system mannitol/fructose-specific enzyme II.
  
  
 
0.915
ABC1104
B component PTS sysytem mannitol-specific enzyme II.
  
  
 
0.913
ptsH
PTS system histidine-containing phosphocarrier protein HPr.
    
  0.903
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.