STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiBGeneral stress protein B. (133 aa)    
Predicted Functional Partners:
ABC3956
General stress protein 17M.
  
    0.742
ABC3728
Conserved hypothetical protein.
  
     0.678
katX
Catalase; Belongs to the catalase family.
   
  
 0.669
ctc
Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
   
  
 0.665
rsbX
Indirect negative regulator of sigma-B activity.
  
  
 0.574
ABC3309
Conserved hypothetical protein.
  
     0.551
ABC3162
Hypothetical protein.
   
  
 0.548
ABC2118
Conserved hypothetical protein.
  
    0.539
ABC1324
Phage-related pre-neck appendage protein.
  
     0.526
bmrU
Multidrug resistance protein.
      
 0.525
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.