STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3513Conserved hypothetical protein. (175 aa)    
Predicted Functional Partners:
ABC3317
Acetyltransferase.
  
     0.642
ABC1552
Hypothetical protein.
  
     0.623
ABC0987
Lipase.
  
     0.498
ABC3787
Butirosin biosynthesis protein BtrG.
  
     0.495
ABC0281
Conserved hypothetical protein.
  
     0.466
kynB
Conserved hypothetical protein; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.
  
     0.418
ABC1482
Conserved hypothetical protein.
  
     0.414
ABC2531
Conserved hypothetical protein.
  
     0.408
ABC2430
Conserved hypothetical protein; Belongs to the UPF0180 family.
  
     0.407
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.