STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lacRLacI family transcriptional regulator. (330 aa)    
Predicted Functional Partners:
ABC3120
Transcriptional regulator of sucrose operon.
  
    0.771
gltA
Glutamate synthase large subunit.
    
 
 0.761
ABC1167
Transcriptional regulator.
  
     0.752
kdgR
LacI family transcriptional regulator.
  
     0.744
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.665
galT
Galactose-1-phosphate uridylyltransferase.
 
  
 0.607
cycB
Sugar ABC transporter substrate-binding protein.
 
  
 0.596
ABC3473
Conserved hypothetical protein.
  
     0.572
ABC0574
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
   
 0.541
ABC3518
Sugar ABC transporter permease.
 
  
 0.522
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.