STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3536Conserved hypothetical protein. (350 aa)    
Predicted Functional Partners:
ABC3535
Conserved hypothetical protein; Probable enzyme that may play an important role in cell wall biology.
  
    0.779
ABC3534
Hypothetical protein.
 
     0.715
ABC3459
Conserved hypothetical protein.
  
     0.573
ABC0479
Hypothetical protein.
  
     0.559
ABC4052
Hypothetical protein.
  
    0.527
ABC0478
Hypothetical protein.
  
     0.521
ABC3619
Hypothetical protein.
  
     0.487
ABC0392
Hypothetical protein.
  
     0.482
ABC2839
Terminase large subunit G2p.
  
     0.472
ABC2834
Structural protein.
  
     0.455
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.