STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3612Transcriptional regulator of sugar metabolism. (262 aa)    
Predicted Functional Partners:
ABC3611
Ribose 5-phosphate isomerase B.
  
  
 0.672
ABC3198
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.628
fruB
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.626
ABC3574
Conserved hypothetical protein.
 
  
 0.622
ABC3613
Oxidoreductase.
  
    0.613
ABC0859
BC component PTS system fructose-specific enzyme II.
  
  
 0.596
fruA
BC component PTS system fructose-specific enzyme II.
  
  
 0.596
ABC3197
BC component PTS system fructose-specific enzyme II.
  
  
 0.596
ABC3610
Dihydroxyacetone kinase.
  
  
 0.564
ABC3608
Fructose-1,6-bisphosphatase.
     
 0.563
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.