STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3625Response regulator aspartate phosphatase. (365 aa)    
Predicted Functional Partners:
spo0F
Stage 0 sporulation protein F.
    
 0.918
ABC3252
Response regulator aspartate phosphatase.
  
  
 
0.911
ABC3645
Response regulator aspartate phosphatase.
     
 
0.900
ABC3221
Conserved hypothetical protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
   
 0.609
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
  
 0.492
ABC1051
Conserved hypothetical protein.
 
 
   0.492
lipB
Triacylglycerol lipase.
 
    0.478
ABC2326
Conserved hypothetical protein.
  
     0.471
ABC0253
Antimicrobial peptide ABC transporter permease.
  
     0.470
ABC1726
Conserved hypothetical protein.
 
 
 
 0.469
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.