Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC3638Conserved hypothetical protein. (288 aa)    
Predicted Functional Partners:
ABC3639
Bacitracin ABC transporter permease.
 
    0.926
ABC3640
Bacitracin ABC transporter ATP-binding protein.
       0.705
ABC0843
ArsR family transcriptional regulator.
 
    0.622
ABC3542
Conserved hypothetical protein.
  
     0.613
ABC3672
Hypothetical protein.
  
     0.573
ABC2648
Hypothetical protein.
 
     0.559
ABC3237
Conserved hypothetical protein.
  
     0.558
ABC3459
Conserved hypothetical protein.
  
     0.553
ABC3139
Conserved hypothetical protein.
  
     0.546
ABC2991
Major facilitator (MFS) superfamily protein.
  
     0.538
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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