STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3638Conserved hypothetical protein. (288 aa)    
Predicted Functional Partners:
ABC3639
Bacitracin ABC transporter permease.
 
    0.909
ABC3640
Bacitracin ABC transporter ATP-binding protein.
  
    0.713
ABC0843
ArsR family transcriptional regulator.
 
    0.622
ABC3542
Conserved hypothetical protein.
  
     0.613
ABC3376
Conserved hypothetical protein.
  
  
 0.582
ABC3672
Hypothetical protein.
  
     0.573
ABC3237
Conserved hypothetical protein.
  
     0.558
ABC2648
Hypothetical protein.
 
     0.557
ABC3459
Conserved hypothetical protein.
  
     0.553
ABC3139
Conserved hypothetical protein.
  
     0.546
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.