STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC3640Bacitracin ABC transporter ATP-binding protein. (307 aa)    
Predicted Functional Partners:
ABC3639
Bacitracin ABC transporter permease.
 
   0.936
ABC3186
Multidrug ABC transporter permease.
 
    0.756
ABC1172
Multidrug ABC transporter permease.
 
   0.755
ABC3638
Conserved hypothetical protein.
       0.705
ABC3726
Translation elongation factor G.
  
  
 0.576
ABC3641
Two-component response regulator.
     
 0.550
ABC1459
Bacteriocin transport permease.
 
 
 0.543
ABC3642
Two-component sensor histidine kinase.
       0.542
ABC0519
Cell-division protein.
 
    0.443
ABC1170
Two-component sensor histidine kinase.
 
     0.404
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.