STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3640Bacitracin ABC transporter ATP-binding protein. (307 aa)    
Predicted Functional Partners:
ABC3639
Bacitracin ABC transporter permease.
 
 
 0.943
ABC1172
Multidrug ABC transporter permease.
 
 
 0.779
ABC3186
Multidrug ABC transporter permease.
 
  
 0.734
ABC3638
Conserved hypothetical protein.
  
    0.713
ABC3726
Translation elongation factor G.
  
  
 0.574
ABC3642
Two-component sensor histidine kinase.
  
    0.544
ABC3641
Two-component response regulator.
     
 0.536
ABC1459
Bacteriocin transport permease.
 
 
 0.534
ABC0519
Cell-division protein.
 
 
 0.451
ABC3554
Hypothetical protein.
  
 
 0.414
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.