STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3646Two-component response regulator. (252 aa)    
Predicted Functional Partners:
ABC3647
Two-component sensor histidine kinase.
 
 
 0.965
ABC3586
Two-component sensor histidine kinase.
 
 
 0.864
ABC0383
Two-component sensor histidine kinase.
 
 
 0.852
ABC1133
Two-component sensor histidine kinase.
 
 
 0.834
ABC0725
Two-component sensor histidine kinase.
 
 
 0.833
ABC3648
Fe3+ ABC transporter permease.
 
     0.739
ABC3650
Fe3+ ABC transporter substrate-binding protein.
 
     0.687
cheA
Chemotaxis protein histidine kinase CheA.
  
 
 0.647
ABC4009
Two-component sensor histidine kinase.
 
 
 0.638
fliM
Flagellar motor switch protein FliM; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation; Belongs to the FliM family.
  
 
 0.593
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.