STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3673Conserved hypothetical protein. (163 aa)    
Predicted Functional Partners:
ABC3674
Conserved hypothetical protein.
 
  
 0.981
ABC2039
Conserved hypothetical protein.
 
  
 0.921
sppA
Signal peptidase SppA.
 
    0.565
ABC0519
Cell-division protein.
  
    0.483
ABC2399
Conserved hypothetical protein.
  
     0.451
ABC0025
Conserved hypothetical protein.
  
  
 0.445
ABC0196
Conserved hypothetical protein.
  
  
 0.445
ABC3364
Pyrophosphatase.
  
     0.442
ABC2746
Conserved hypothetical protein.
 
    0.438
ABC3028
Conserved hypothetical protein.
   
    0.426
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.