STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3674Conserved hypothetical protein. (502 aa)    
Predicted Functional Partners:
ABC3673
Conserved hypothetical protein.
 
  
 0.974
ABC2040
Conserved hypothetical protein.
 
  
 0.894
ABC3364
Pyrophosphatase.
  
   
 0.512
ABC2399
Conserved hypothetical protein.
  
     0.492
sppA
Signal peptidase SppA.
 
    0.467
ABC0794
Conserved hypothetical protein.
  
    0.457
ABC2746
Conserved hypothetical protein.
 
    0.451
ABC1906
Conserved hypothetical protein.
  
     0.417
ABC0230
Conserved hypothetical protein.
  
     0.407
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.