STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3697Sugar transferase. (224 aa)    
Predicted Functional Partners:
ABC3815
Tyrosine-protein kinase.
 
  
 0.882
ABC3816
Capsular polysaccharide biosynthesis protein.
 
  
 0.848
gtaB
UTP-glucose-1-phosphate uridylyltransferase.
     
 0.762
ABC3814
Capsular polysaccharide biosynthesis protein.
 
  
 0.735
ABC3687
O-antigen transporter.
 
  
 0.647
ABC3694
Glycosyltransferase.
 
  
 0.619
ABC3105
Glycosyltransferase.
   
 0.601
tuaG
Glycosyltransferase.
  
 0.591
spsK
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.569
ABC3172
Hypothetical protein.
 
  
 0.567
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.