STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pucBXanthine dehydrogenase subunit D. (749 aa)    
Predicted Functional Partners:
pucA
Xanthine dehydrogenase subunit E.
 0.999
pucC
Xanthine dehydrogenase subunit C.
 0.999
pucE
Xanthine dehydrogenase subunit A.
 
  
 0.967
pucD
Xanthine dehydrogenase subunit B.
 
   
 0.961
ABC3735
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
   
 0.824
ABC3736
Uricase.
 
   
 0.672
pucM
Transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.590
ABC3745
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein.
 
     0.588
ABC3783
D-hydantoinase.
 
  
 0.554
ABC3746
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
     0.530
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.