STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pucEXanthine dehydrogenase subunit A. (334 aa)    
Predicted Functional Partners:
pucC
Xanthine dehydrogenase subunit C.
 
  
 0.987
pucD
Xanthine dehydrogenase subunit B.
 
  
 0.980
pucB
Xanthine dehydrogenase subunit D.
 
  
 0.972
pucA
Xanthine dehydrogenase subunit E.
 
  
 0.971
ABC3745
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein.
 
     0.548
ABC3746
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
   
 0.537
ABC3735
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
     0.494
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
    0.457
ABC3747
Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein.
       0.451
ABC3372
Molybdenum ABC transporter substrate-binding protein.
 
   
 0.430
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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