STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3756Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (583 aa)    
Predicted Functional Partners:
ABC1212
Conserved hypothetical protein.
 
     0.597
ABC0398
Sugar ABC transporter substrate-binding protein.
 
     0.585
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.561
ptsG
ABC component PTS system glucose-specific enzyme II.
  
  
 0.547
bglP
A component PTS system glucose-specific enzyme II.
  
  
 0.547
lacA
Beta-galactosidase.
 
 
 0.521
ABC0722
Nitrate/nitrite transporter.
  
  
 0.492
ABC1405
Beta-galactosidase.
 
 
 0.487
ABC0576
Conserved hypothetical protein.
  
     0.485
ABC3763
Transcriptional regulator.
 
     0.477
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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