Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0398 | ABC1405 | ABC0398 | ABC1405 | Sugar ABC transporter substrate-binding protein. | Beta-galactosidase. | 0.403 |
ABC0398 | ABC3756 | ABC0398 | ABC3756 | Sugar ABC transporter substrate-binding protein. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.582 |
ABC0398 | lacA | ABC0398 | ABC3516 | Sugar ABC transporter substrate-binding protein. | Beta-galactosidase. | 0.405 |
ABC1212 | ABC1405 | ABC1212 | ABC1405 | Conserved hypothetical protein. | Beta-galactosidase. | 0.458 |
ABC1212 | ABC3756 | ABC1212 | ABC3756 | Conserved hypothetical protein. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.598 |
ABC1212 | lacA | ABC1212 | ABC3516 | Conserved hypothetical protein. | Beta-galactosidase. | 0.429 |
ABC1405 | ABC0398 | ABC1405 | ABC0398 | Beta-galactosidase. | Sugar ABC transporter substrate-binding protein. | 0.403 |
ABC1405 | ABC1212 | ABC1405 | ABC1212 | Beta-galactosidase. | Conserved hypothetical protein. | 0.458 |
ABC1405 | ABC3756 | ABC1405 | ABC3756 | Beta-galactosidase. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.527 |
ABC1405 | lacA | ABC1405 | ABC3516 | Beta-galactosidase. | Beta-galactosidase. | 0.909 |
ABC3198 | ABC3345 | ABC3198 | ABC3345 | Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | C component PTS system galactitol-specific enzyme II. | 0.646 |
ABC3198 | ABC3570 | ABC3198 | ABC3570 | Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | C component PTS system galactitol-specific enzyme II. | 0.646 |
ABC3198 | ABC3756 | ABC3198 | ABC3756 | Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.638 |
ABC3198 | fruB | ABC3198 | ABC1270 | Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.912 |
ABC3345 | ABC3198 | ABC3345 | ABC3198 | C component PTS system galactitol-specific enzyme II. | Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.646 |
ABC3345 | ABC3570 | ABC3345 | ABC3570 | C component PTS system galactitol-specific enzyme II. | C component PTS system galactitol-specific enzyme II. | 0.906 |
ABC3345 | ABC3574 | ABC3345 | ABC3574 | C component PTS system galactitol-specific enzyme II. | Conserved hypothetical protein. | 0.575 |
ABC3345 | ABC3756 | ABC3345 | ABC3756 | C component PTS system galactitol-specific enzyme II. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.687 |
ABC3345 | fruB | ABC3345 | ABC1270 | C component PTS system galactitol-specific enzyme II. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.646 |
ABC3570 | ABC3198 | ABC3570 | ABC3198 | C component PTS system galactitol-specific enzyme II. | Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.646 |
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