STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3757Conserved hypothetical protein. (290 aa)    
Predicted Functional Partners:
ABC3759
S-adenosylmethionine:2-demethylmenaquinone methyltransferase.
    0.873
ABC3761
C4-dicarboxylate transport system permease large protein.
 
    0.747
ABC3758
RpiR family transcriptional regulator.
       0.708
ABC3638
Conserved hypothetical protein.
  
     0.480
ABC4082
Conserved hypothetical protein.
 
  
 0.467
ABC3760
Hypothetical protein.
       0.455
ABC0629
Conserved hypothetical protein.
 
     0.423
ABC3756
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
       0.417
ABC3639
Bacitracin ABC transporter permease.
 
     0.412
ABC4076
L-fuculose phosphate aldolase.
 
  
 0.405
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.