STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3771NRAMP family Mn2+/Fe2+ transporter. (403 aa)    
Predicted Functional Partners:
pxpA
Lactam utilization protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
 0.993
ABC3772
Conserved hypothetical protein.
 
  
 0.976
ABC3773
Conserved hypothetical protein.
 
  
 0.976
ABC1111
IclR family transcriptional regulator.
  
  
 0.520
ABC2172
IclR family transcriptional regulator.
  
  
 0.520
ABC3624
IclR family transcriptional regulator.
  
  
 0.520
ABC0571
IclR family transcriptional regulator.
  
  
 0.481
ABC2324
Calcium-transporting ATPase.
   
 0.400
ABC3368
Cation-transporting ATPase.
   
 0.400
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.