Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC3328 | ABC3781 | ABC3328 | ABC3781 | N-carbamoyl-L-amino acid hydrolase. | Glutamate synthase small subunit. | 0.809 |
ABC3328 | ABC3782 | ABC3328 | ABC3782 | N-carbamoyl-L-amino acid hydrolase. | Dihydropyrimidine dehydrogenase. | 0.876 |
ABC3328 | ABC3783 | ABC3328 | ABC3783 | N-carbamoyl-L-amino acid hydrolase. | D-hydantoinase. | 0.938 |
ABC3328 | ABC3785 | ABC3328 | ABC3785 | N-carbamoyl-L-amino acid hydrolase. | N-carbamoyl-L-amino acid amidohydrolase. | 0.918 |
ABC3781 | ABC3328 | ABC3781 | ABC3328 | Glutamate synthase small subunit. | N-carbamoyl-L-amino acid hydrolase. | 0.809 |
ABC3781 | ABC3782 | ABC3781 | ABC3782 | Glutamate synthase small subunit. | Dihydropyrimidine dehydrogenase. | 0.999 |
ABC3781 | ABC3783 | ABC3781 | ABC3783 | Glutamate synthase small subunit. | D-hydantoinase. | 0.986 |
ABC3781 | ABC3785 | ABC3781 | ABC3785 | Glutamate synthase small subunit. | N-carbamoyl-L-amino acid amidohydrolase. | 0.892 |
ABC3781 | ABC3786 | ABC3781 | ABC3786 | Glutamate synthase small subunit. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.613 |
ABC3781 | pyrDI | ABC3781 | ABC2331 | Glutamate synthase small subunit. | Dihydroorotate dehydrogenase catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate with NAD(+) as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily. | 0.960 |
ABC3781 | pyrR | ABC3781 | ABC2338 | Glutamate synthase small subunit. | Bifunctional pyrimidine biosynthesis protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.900 |
ABC3782 | ABC3328 | ABC3782 | ABC3328 | Dihydropyrimidine dehydrogenase. | N-carbamoyl-L-amino acid hydrolase. | 0.876 |
ABC3782 | ABC3781 | ABC3782 | ABC3781 | Dihydropyrimidine dehydrogenase. | Glutamate synthase small subunit. | 0.999 |
ABC3782 | ABC3783 | ABC3782 | ABC3783 | Dihydropyrimidine dehydrogenase. | D-hydantoinase. | 0.997 |
ABC3782 | ABC3785 | ABC3782 | ABC3785 | Dihydropyrimidine dehydrogenase. | N-carbamoyl-L-amino acid amidohydrolase. | 0.938 |
ABC3782 | ABC3786 | ABC3782 | ABC3786 | Dihydropyrimidine dehydrogenase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.678 |
ABC3782 | pyrB | ABC3782 | ABC2336 | Dihydropyrimidine dehydrogenase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.842 |
ABC3782 | pyrE | ABC3782 | ABC2329 | Dihydropyrimidine dehydrogenase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.864 |
ABC3782 | pyrF | ABC3782 | ABC2330 | Dihydropyrimidine dehydrogenase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.828 |
ABC3782 | pyrR | ABC3782 | ABC2338 | Dihydropyrimidine dehydrogenase. | Bifunctional pyrimidine biosynthesis protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.959 |
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