STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3849Conserved hypothetical protein. (77 aa)    
Predicted Functional Partners:
ABC3848
Hypothetical protein.
 
    0.765
ABC2935
Conserved hypothetical protein.
  
     0.671
ABC1274
Conserved hypothetical protein.
  
     0.663
mreD
Rod shape-determining protein MreD.
  
     0.620
ABC0723
Conserved hypothetical protein.
  
     0.579
ABC4007
Conserved hypothetical protein.
  
     0.559
ABC2204
Conserved hypothetical protein.
  
     0.553
ABC2624
Conserved hypothetical protein.
  
     0.548
ABC1564
Conserved hypothetical protein.
  
     0.533
ABC1996
Conserved hypothetical protein; Belongs to the HesB/IscA family.
  
     0.533
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.