STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spo0FStage 0 sporulation protein F. (120 aa)    
Predicted Functional Partners:
spo0B
Stage 0 sporulation protein B.
    
 0.990
kinB
Sporulation kinase B.
  
  
 0.976
ABC3645
Response regulator aspartate phosphatase.
    
 0.927
spo0A
Stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
 
0.922
ABC3252
Response regulator aspartate phosphatase.
    
 0.920
ABC3323
Response regulator aspartate phosphatase.
    
 0.920
ABC3625
Response regulator aspartate phosphatase.
    
 0.920
rapB
Response regulator aspartate phosphatase.
    
 0.920
ABC0593
Xre family transcriptional regulator.
    
 
 0.857
kinD
Two-component sensor histidine kinase.
  
  
 0.825
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.