Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spo0FStage 0 sporulation protein F. (120 aa)    
Predicted Functional Partners:
spo0B
Stage 0 sporulation protein B.
    
 0.997
kinB
Sporulation kinase B.
  
  
 0.976
spo0A
Stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
 
0.951
ABC3645
Response regulator aspartate phosphatase.
    
 0.927
ABC3252
Response regulator aspartate phosphatase.
    
 0.918
ABC3625
Response regulator aspartate phosphatase.
    
 0.918
kinD
Two-component sensor histidine kinase.
  
  
 0.869
ABC0593
Xre family transcriptional regulator.
    
 
 0.848
ABC4009
Two-component sensor histidine kinase.
  
   
 0.773
ABC1749
Two-component sensor histidine kinase.
  
   
 0.771
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.