STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3896Conserved hypothetical protein. (143 aa)    
Predicted Functional Partners:
argS
arginyl-tRNA synthetase.
  
    0.823
ABC2935
Conserved hypothetical protein.
  
     0.705
ABC0908
HAD superfamily hydrolase.
 
     0.651
ABC2561
Conserved hypothetical protein.
  
     0.645
ABC1866
Conserved hypothetical protein.
  
     0.626
ABC1564
Conserved hypothetical protein.
  
     0.594
ABC2447
Conserved hypothetical protein.
  
     0.581
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
    0.580
ABC2036
Tellurite resistance protein; Belongs to the TelA family.
  
     0.576
ABC2288
arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.576
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.