STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3906Conserved hypothetical protein. (169 aa)    
Predicted Functional Partners:
ABC3907
Conserved hypothetical protein.
 
   0.898
ABC2638
Conserved hypothetical protein.
  
     0.760
ABC3838
Conserved hypothetical protein.
  
     0.741
ABC1600
Hypothetical protein.
  
     0.725
ABC2421
Lipoprotein.
  
     0.711
ABC2886
Conserved hypothetical protein.
  
     0.706
ABC2726
Conserved hypothetical protein.
  
     0.695
ABC2399
Conserved hypothetical protein.
  
     0.682
ABC2536
Conserved hypothetical protein; Belongs to the UPF0736 family.
  
     0.672
ABC2797
DeoR family transcriptional regulator.
  
     0.670
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.