STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3944Thioredoxin. (155 aa)    
Predicted Functional Partners:
bdbC
Disulfide formation protein; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.
 
  
 0.985
groEL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.682
nrdE
Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.622
ABC3946
Rieske [2Fe-2S] iron-sulfur protein.
  
   0.554
gltA
Glutamate synthase large subunit.
   
 
 0.527
ABC2923
Conserved hypothetical protein.
  
     0.515
ABC2379
Conserved hypothetical protein.
  
     0.511
ABC2103
Conserved hypothetical protein.
  
   
 0.494
ABC1741
2'-5' RNA ligase; Belongs to the 2H phosphoesterase superfamily. YjcG family.
 
     0.479
ABC1496
Conserved hypothetical protein.
  
    0.478
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.