STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3949Flotillin-like protein. (485 aa)    
Predicted Functional Partners:
ABC3948
Conserved hypothetical protein.
 
  
 0.990
ABC3377
Conserved hypothetical protein.
  
  
 0.631
ABC1672
Conserved hypothetical protein.
   
  
 0.556
ABC3947
Hypothetical protein.
       0.492
ABC1673
Hypothetical protein.
   
    0.434
ABC1671
Conserved hypothetical protein.
   
    0.433
ABC0691
DNA segregation ATPase.
  
   
 0.411
ABC0690
Conserved hypothetical protein.
  
     0.408
ABC1267
Nitric-oxide synthase oxygenase subunit; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
  
     0.405
ABC2408
Conserved hypothetical protein.
  
 
  0.404
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.