Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABC3973 | bmrU | ABC3973 | ABC3974 | Conserved hypothetical protein. | Multidrug resistance protein. | 0.532 |
| bmrU | ABC3973 | ABC3974 | ABC3973 | Multidrug resistance protein. | Conserved hypothetical protein. | 0.532 |
| bmrU | ctc | ABC3974 | ABC0080 | Multidrug resistance protein. | Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.600 |
| bmrU | groEL | ABC3974 | ABC0882 | Multidrug resistance protein. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.516 |
| bmrU | gsiB | ABC3974 | ABC3507 | Multidrug resistance protein. | General stress protein B. | 0.525 |
| bmrU | gtaB | ABC3974 | ABC3698 | Multidrug resistance protein. | UTP-glucose-1-phosphate uridylyltransferase. | 0.533 |
| bmrU | katX | ABC3974 | ABC3969 | Multidrug resistance protein. | Catalase; Belongs to the catalase family. | 0.656 |
| bmrU | opuD | ABC3974 | ABC1626 | Multidrug resistance protein. | Glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.522 |
| bmrU | phoP | ABC3974 | ABC2711 | Multidrug resistance protein. | Two-component response regulator of alkaline phosphatase synthesis. | 0.483 |
| bmrU | phoR | ABC3974 | ABC2710 | Multidrug resistance protein. | Two-component sensor histidine kinase. | 0.551 |
| bmrU | sigH | ABC3974 | ABC0133 | Multidrug resistance protein. | DNA-directed RNA polymerase sigma-30 factor sigma-H; Belongs to the sigma-70 factor family. | 0.480 |
| ctc | bmrU | ABC0080 | ABC3974 | Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | Multidrug resistance protein. | 0.600 |
| ctc | groEL | ABC0080 | ABC0882 | Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.484 |
| ctc | gsiB | ABC0080 | ABC3507 | Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | General stress protein B. | 0.665 |
| ctc | gtaB | ABC0080 | ABC3698 | Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | UTP-glucose-1-phosphate uridylyltransferase. | 0.658 |
| ctc | katX | ABC0080 | ABC3969 | Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | Catalase; Belongs to the catalase family. | 0.560 |
| ctc | opuD | ABC0080 | ABC1626 | Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | Glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.559 |
| ctc | phoP | ABC0080 | ABC2711 | Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | Two-component response regulator of alkaline phosphatase synthesis. | 0.483 |
| ctc | phoR | ABC0080 | ABC2710 | Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | Two-component sensor histidine kinase. | 0.622 |
| ctc | sigH | ABC0080 | ABC0133 | Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | DNA-directed RNA polymerase sigma-30 factor sigma-H; Belongs to the sigma-70 factor family. | 0.493 |
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