STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC3997Conserved hypothetical protein. (211 aa)    
Predicted Functional Partners:
ABC1383
FAD-dependent monooxygenase.
   
  
 0.565
ABC1424
Conserved hypothetical protein.
   
  
 0.565
ABC3995
Two-component response regulator.
       0.551
ABC3996
Two-component sensor histidine kinase.
       0.551
ABC1377
Conserved hypothetical protein.
  
     0.528
dxs
1-deoxy-D-xylulose 5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
 
  
 0.430
ABC3311
HAD superfamily hydrolase.
 
     0.424
ABC3994
Sodium:dicarboxylate cotransporter.
  
  
 0.416
ABC1887
4-hydroxybenzoate octaprenyltransferase; Belongs to the UbiA prenyltransferase family.
  
  
 0.406
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.