Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC4003Conserved hypothetical protein. (187 aa)    
Predicted Functional Partners:
ABC1095
Conserved hypothetical protein.
 
     0.679
ABC1394
Conserved hypothetical protein.
  
     0.570
ABC4004
S-adenosylmethionine (SAM)-dependent methyltransferase.
 
     0.532
ABC3490
Conserved hypothetical protein.
  
     0.475
ABC1482
Conserved hypothetical protein.
  
     0.454
ABC4002
Major facilitator (MFS) superfamily macrolide-efflux protein.
       0.447
ABC1397
Conserved hypothetical protein.
  
     0.444
ABC3601
Conserved hypothetical protein.
  
     0.401
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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