Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0389 | ABC0495 | ABC0389 | ABC0495 | Two-component sensor histidine kinase. | Two-component sensor histidine kinase; Probable gene remnant. Similar to the C-terminal region of Bacillus anthracis DNA-binding response regulator BA2212 (227 aa) TR:Q81R46; locus_tag:ABC0493. | 0.929 |
ABC0389 | ABC1700 | ABC0389 | ABC1700 | Two-component sensor histidine kinase. | Stage II sporulation protein J; Sporulation kinase A. | 0.781 |
ABC0389 | ABC4010 | ABC0389 | ABC4010 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.852 |
ABC0495 | ABC0389 | ABC0495 | ABC0389 | Two-component sensor histidine kinase; Probable gene remnant. Similar to the C-terminal region of Bacillus anthracis DNA-binding response regulator BA2212 (227 aa) TR:Q81R46; locus_tag:ABC0493. | Two-component sensor histidine kinase. | 0.929 |
ABC0495 | ABC1700 | ABC0495 | ABC1700 | Two-component sensor histidine kinase; Probable gene remnant. Similar to the C-terminal region of Bacillus anthracis DNA-binding response regulator BA2212 (227 aa) TR:Q81R46; locus_tag:ABC0493. | Stage II sporulation protein J; Sporulation kinase A. | 0.422 |
ABC0495 | ABC4010 | ABC0495 | ABC4010 | Two-component sensor histidine kinase; Probable gene remnant. Similar to the C-terminal region of Bacillus anthracis DNA-binding response regulator BA2212 (227 aa) TR:Q81R46; locus_tag:ABC0493. | Two-component response regulator. | 0.821 |
ABC0528 | ABC1700 | ABC0528 | ABC1700 | Two-component sensor histidine kinase. | Stage II sporulation protein J; Sporulation kinase A. | 0.437 |
ABC0528 | ABC4010 | ABC0528 | ABC4010 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.840 |
ABC1700 | ABC0389 | ABC1700 | ABC0389 | Stage II sporulation protein J; Sporulation kinase A. | Two-component sensor histidine kinase. | 0.781 |
ABC1700 | ABC0495 | ABC1700 | ABC0495 | Stage II sporulation protein J; Sporulation kinase A. | Two-component sensor histidine kinase; Probable gene remnant. Similar to the C-terminal region of Bacillus anthracis DNA-binding response regulator BA2212 (227 aa) TR:Q81R46; locus_tag:ABC0493. | 0.422 |
ABC1700 | ABC0528 | ABC1700 | ABC0528 | Stage II sporulation protein J; Sporulation kinase A. | Two-component sensor histidine kinase. | 0.437 |
ABC1700 | ABC1749 | ABC1700 | ABC1749 | Stage II sporulation protein J; Sporulation kinase A. | Two-component sensor histidine kinase. | 0.456 |
ABC1700 | ABC1860 | ABC1700 | ABC1860 | Stage II sporulation protein J; Sporulation kinase A. | Two-component sensor histidine kinase. | 0.498 |
ABC1700 | ABC3552 | ABC1700 | ABC3552 | Stage II sporulation protein J; Sporulation kinase A. | Two-component sensor histidine kinase. | 0.433 |
ABC1700 | ABC4009 | ABC1700 | ABC4009 | Stage II sporulation protein J; Sporulation kinase A. | Two-component sensor histidine kinase. | 0.494 |
ABC1700 | ABC4010 | ABC1700 | ABC4010 | Stage II sporulation protein J; Sporulation kinase A. | Two-component response regulator. | 0.838 |
ABC1700 | phoR | ABC1700 | ABC2710 | Stage II sporulation protein J; Sporulation kinase A. | Two-component sensor histidine kinase. | 0.435 |
ABC1700 | resE | ABC1700 | ABC1836 | Stage II sporulation protein J; Sporulation kinase A. | Two-component sensor histidine kinase. | 0.441 |
ABC1749 | ABC1700 | ABC1749 | ABC1700 | Two-component sensor histidine kinase. | Stage II sporulation protein J; Sporulation kinase A. | 0.456 |
ABC1749 | ABC4010 | ABC1749 | ABC4010 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.849 |
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