STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC4022Glyoxylase. (325 aa)    
Predicted Functional Partners:
ABC2025
Esterase.
    0.947
ABC1713
Oxidoreductase.
 
    0.761
ABC2026
Conserved hypothetical protein.
 
  
0.721
ABC0839
Conserved hypothetical protein.
 
  
 0.674
ABC3972
Conserved hypothetical protein.
 
  
 0.563
ABC4023
3-polyprenyl-4-hydroxybenzoate decarboxylase; Belongs to the UbiD family.
     
 0.492
deoD
Purine-nucleoside phosphorylase.
       0.475
ABC3767
NAD(P)H nitroreductase.
 
    0.452
sdhC
Succinate dehydrogenase cytochrome b558 subunit.
   
  
 0.435
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.