STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC4038GntR family transcriptional regulator. (241 aa)    
Predicted Functional Partners:
ABC4035
Conserved hypothetical protein.
     
 0.784
ABC4037
Glycolate oxidase subunit.
  
  
 0.783
ABC4036
Glycolate oxidase iron-sulfur subunit.
     
 0.781
ABC0546
Transcriptional regulator.
 
  
 0.768
ABC0840
GntR family transcriptional regulator.
 
  
 0.758
ABC4081
GntR family transcriptional regulator.
 
  
 0.743
ABC1486
GntR family transcriptional regulator.
  
    0.646
ABC0491
GntR family transcriptional regulator.
  
    0.644
ABC1488
GntR family transcriptional regulator.
  
    0.643
ABC4039
GntR family transcriptional regulator.
 
    
0.638
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.