STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytTTwo-component response regulator. (246 aa)    
Predicted Functional Partners:
lytS
Two-component sensor histidine kinase.
 
 0.998
ABC3647
Two-component sensor histidine kinase.
 
 
 0.885
ABC3586
Two-component sensor histidine kinase.
 
  
 0.835
ABC0383
Two-component sensor histidine kinase.
 
  
 0.834
ABC0725
Two-component sensor histidine kinase.
 
  
 0.825
ABC1133
Two-component sensor histidine kinase.
 
  
 0.811
ABC4056
Carbon starvation-induced protein.
 
   
 0.614
ABC4059
TetR/AcrR family transcriptional regulator.
     
 0.471
nreC
Two-component response regulator of nitrate reduction.
  
   
 0.431
ABC1045
Two-component response regulator.
  
   
 0.424
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.