STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC4066Oligopeptide ABC transporter substrate-binding protein. (553 aa)    
Predicted Functional Partners:
ABC4065
Oligopeptide ABC transporter permease.
 
 
 0.935
ABC4064
Oligopeptide ABC transporter permease.
 
 
 0.926
ABC1242
Oligopeptide ABC transporter permease.
 
 
 0.832
ABC0233
Dipeptide/oligopeptide/nickel ABC transporter permease.
 
 
 0.827
ABC2413
Oligopeptide ABC transporter permease.
 
 
 0.823
ABC1241
Oligopeptide ABC transporter permease.
 
 
 0.820
ABC0031
Oligopeptide ABC transporter permease.
 
 
 0.819
ABC0032
Oligopeptide ABC transporter permease.
 
 
 0.817
ABC0565
Oligopeptide ABC transporter permease.
 
 
 0.814
ABC3660
Oligopeptide ABC transporter permease.
 
 
 0.814
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.