STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC4096Conserved hypothetical protein. (298 aa)    
Predicted Functional Partners:
ABC4097
Conserved hypothetical protein.
 
  
 0.947
ABC4098
Two-component sensor histidine kinase.
 
  
 0.884
ABC4099
Two-component response regulator.
  
  
 0.854
ABC4095
Metal-dependent hydrolase.
  
  
 0.852
ABC2771
Conserved hypothetical protein; Belongs to the UPF0354 family.
  
     0.700
ABC4094
Serine protease.
 
  
 0.686
erzA
Negative regulator of FtsZ ring formation.
  
     0.630
ABC1600
Hypothetical protein.
  
     0.618
ABC2677
Conserved hypothetical protein.
  
     0.603
ABC1845
Conserved hypothetical protein.
  
     0.598
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.