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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH43888.1FAD linked oxidase domain protein; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113:IPR016166:IPR020904; KEGG: sfu:Sfum_0534 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase domain protein; SPTR: FAD linked oxidase domain protein; manually curated; IMG reference gene:2505283283; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD. (457 aa)    
Predicted Functional Partners:
AEH45875.1
CoB--CoM heterodisulfide reductase; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR012257:IPR017900:IPR004017:IPR017896; KEGG: tye:THEYE_A0667 iron-sulfur cluster-binding protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: Iron-sulfur cluster-binding protein; IMG reference gene:2505285361; PFAM: Cysteine-rich domain.
 
 0.983
AEH43989.1
COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017:IPR017896:IPR017900; KEGG: drt:Dret_1037 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505283386; PFAM: Cysteine-rich domain.
 
 
 0.961
AEH44441.1
Haloacid dehalogenase domain protein hydrolase; COGs: COG0546 phosphatase; InterPro IPR005834:IPR005833; KEGG: dak:DaAHT2_2039 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; IMG reference gene:2505283854; PFAM: haloacid dehalogenase-like hydrolase.
    
 0.910
AEH45876.1
FAD linked oxidase domain protein; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113:IPR016166; KEGG: tye:THEYE_A0668 glycolate oxidase subunit; PFAM: FAD linked oxidase domain protein; SPTR: Glycolate oxidase subunit; IMG reference gene:2505285362; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD.
  
  
 
0.908
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
       0.801
AEH44254.1
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730:IPR012255; KEGG: tye:THEYE_A1636 electron transfer flavoprotein beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein beta-subunit; IMG reference gene:2505283661; PFAM: Electron transfer flavoprotein domain.
 
 
 0.705
AEH44255.1
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731:IPR001308; KEGG: nth:Nther_1879 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein alpha/beta-subunit; IMG reference gene:2505283662; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 
 0.705
AEH43889.1
COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: nde:NIDE0547 putative TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative uncharacterized protein; IMG reference gene:2505283284; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
    0.601
AEH43890.1
Hypothetical protein; COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; KEGG: gur:Gura_2427 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505283285; PFAM: ABC transporter substrate binding protein.
       0.594
AEH43891.1
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003660:IPR003661:IPR003594:IPR 005467; KEGG: geo:Geob_1632 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: Cell cycle histidine kinase CckA; IMG reference gene:2505283286; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like A [...]
       0.592
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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