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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH43943.1Protein of unknown function DUF820; COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: ddf:DEFDS_1242 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; IMG reference gene:2505283340; PFAM: Protein of unknown function (DUF820). (192 aa)    
Predicted Functional Partners:
AEH43944.1
COGs: COG1522 Transcriptional regulators; InterPro IPR019888; KEGG: dol:Dole_2996 AsnC family transcriptional regulator; SMART: Transcription regulator AsnC-type; SPTR: Putative transcriptional regulator, AsnC family; IMG reference gene:2505283341.
       0.566
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814:IPR004639; KEGG: mta:Moth_1244 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: aminotransferase class-III; SPTR: Glutamate-1-semialdehyde 2,1-aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; IMG reference gene:2505283342; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase.
       0.551
AEH45226.1
PilT protein domain protein; InterPro IPR002716; KEGG: pmx:PERMA_1863 PIN domain protein; PFAM: PilT protein domain protein; SPTR: PIN domain protein; IMG reference gene:2505284674; PFAM: PIN domain.
  
     0.481
AEH45211.1
Protein of unknown function DUF433; COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: ava:Ava_2493 hypothetical protein; PFAM: protein of unknown function DUF433; SPTR: Putative uncharacterized protein; IMG reference gene:2505284658; PFAM: Protein of unknown function (DUF433).
  
     0.450
AEH45361.1
Hypothetical protein; COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: ter:Tery_4273 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284817; PFAM: Domain of unknown function (DUF3368).
  
     0.439
AEH45210.1
COGs: COG4634 conserved hypothetical protein; KEGG: xfa:XF2029 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284657.
  
     0.438
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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