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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH43952.1DnaJ like protein; InterPro IPR018961; KEGG: drt:Dret_1391 DnaJ-like, subfamily C, member 28; PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; SPTR: DnaJ-like, subfamily C, member 28; IMG reference gene:2505283349; PFAM: Domain of unknown function (DUF1992). (173 aa)    
Predicted Functional Partners:
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.557
AEH44616.1
N-acylneuraminate cytidylyltransferase; COGs: COG1083 CMP-N-acetylneuraminic acid synthetase; InterPro IPR003329; KEGG: mru:mru_1876 CMP-N-acetylneuraminic acid synthetase NeuA; PFAM: acylneuraminate cytidylyltransferase; PRIAM: N-acylneuraminate cytidylyltransferase; SPTR: CMP-N-acetylneuraminic acid synthetase NeuA; IMG reference gene:2505284033; PFAM: Cytidylyltransferase; Glycosyltransferase family 28 C-terminal domain.
  
  
 0.542
AEH43953.1
COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372:IPR005790; KEGG: gem:GM21_0770 DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; SPTR: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; IMG reference gene:2505283350; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit.
       0.531
AEH43951.1
Protein of unknown function DUF1555; InterPro IPR011449:IPR013424; KEGG: cps:CPS_0379 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; IMG reference gene:2505283348; TIGRFAM: PEP-CTERM putative exosortase interaction domain.
       0.418
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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