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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palPeptidoglycan-associated lipoprotein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664:IPR006665:IPR014169; KEGG: gme:Gmet_3541 OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: OmpA/MotB; TIGRFAM: peptidoglycan-associated lipoprotein; IMG reference gene:2505283371; PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family. (204 aa)    
Predicted Functional Partners:
AEH44252.1
TolB domain-containing protein; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659:IPR014167; KEGG: sfu:Sfum_0755 TolB domain-containing protein; SPTR: TolB, N-terminal domain protein; IMG reference gene:2505283659; PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB.
 
 
 0.956
AEH43975.1
Outer membrane chaperone Skp (OmpH); InterPro IPR000293:IPR005632; KEGG: tye:THEYE_A0093 outer membrane protein, putative; PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein, putative; IMG reference gene:2505283372; PFAM: Outer membrane protein (OmpH-like).
 
 
 0.936
AEH44801.1
Lytic transglycosylase catalytic; InterPro IPR002482:IPR008258:IPR018392; KEGG: dal:Dalk_1929 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SPTR: Lytic transglycosylase catalytic; IMG reference gene:2505284233; PFAM: Transglycosylase SLT domain; LysM domain.
 
 
 0.818
murJ
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
 
   
 0.807
AEH45154.1
MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: dat:HRM2_30590 TolQ1; PFAM: MotA/TolQ/ExbB proton channel; SPTR: TolQ1; IMG reference gene:2505284601; PFAM: MotA/TolQ/ExbB proton channel family.
 
   
 0.782
glk
Glucokinase; COGs: COG0837 Glucokinase; InterPro IPR003836; KEGG: dps:DP1060 glucokinase; PFAM: Glucokinase; PRIAM: Glucokinase; SPTR: Glucokinase; TIGRFAM: glucokinase; IMG reference gene:2505283373; PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; Belongs to the bacterial glucokinase family.
     
 0.775
AEH44484.1
COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR010827:IPR000184; KEGG: dak:DaAHT2_1309 outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Surface antigen (D15):Surface antigen variable number; TIGRFAM: outer membrane protein assembly complex, YaeT protein; IMG reference gene:2505283898; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
 
 0.766
AEH43973.1
KEGG: sfu:Sfum_1128 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505283370.
       0.762
AEH44250.1
Protein TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR014168:IPR003400; KEGG: tye:THEYE_A0958 TolR protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: TolR protein; TIGRFAM: protein TolR; IMG reference gene:2505283657; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein.
 
 
 
 0.737
AEH43977.1
KEGG: vsa:VSAL_II0726 membrane protein; SPTR: Membrane protein; manually curated; IMG reference gene:2505283374.
       0.721
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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