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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44043.1Tetratricopeptide repeat protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734:IPR013026; KEGG: dak:DaAHT2_1672 TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat:Tetratricopeptide TPR_4; IMG reference gene:2505283441; PFAM: Tetratricopeptide repeat. (206 aa)    
Predicted Functional Partners:
AEH44045.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440:IPR013026:IPR019734; KEGG: nve:NEMVE_v1g201578 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Predicted protein; IMG reference gene:2505283443.
 
     0.848
AEH44044.1
KEGG: dak:DaAHT2_1673 heat repeat-containing PBS lyase; SPTR: Heat repeat-containing PBS lyase; IMG reference gene:2505283442.
  
   0.832
AEH45563.1
InterPro IPR019734:IPR013026:IPR001440; KEGG: mar:MAE_03780 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide repeat protein; IMG reference gene:2505285028; PFAM: Tetratricopeptide repeat.
  
   
 0.719
AEH44569.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: hsm:HSM_0164 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase, family 2; IMG reference gene:2505283985; PFAM: Glycosyl transferase family 2.
  
 
 0.687
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.649
AEH45853.1
Hypothetical protein; InterPro IPR018391; KEGG: dal:Dalk_4066 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505285336.
   
 0.644
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.615
AEH44001.1
Transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR001808:IPR000595:IPR012318; KEGG: dal:Dalk_2705 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: Transcriptional regulator, Crp/Fnr family; IMG reference gene:2505283398; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain.
   
 0.613
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.609
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.578
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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