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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44101.1CRISPR-associated protein Cas6; COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR002743:IPR010156; KEGG: rxy:Rxyl_0271 CRISPR-associated Cas6 family protein; PFAM: protein of unknown function DUF57; SPTR: CRISPR-associated protein, Cas6 family; TIGRFAM: CRISPR-associated protein Cas6; IMG reference gene:2505283500; PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6. (272 aa)    
Predicted Functional Partners:
AEH44116.1
CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
 
   
 0.828
AEH44103.1
InterPro IPR005537; KEGG: adg:Adeg_0804 protein of unknown function DUF324; PFAM: protein of unknown function DUF324; SPTR: Putative uncharacterized protein; IMG reference gene:2505283502; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr6.
 
   
 0.805
AEH44107.1
CRISPR-associated RAMP protein, Cmr4 family; COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR013410; KEGG: pth:PTH_0712 hypothetical protein; PFAM: protein of unknown function DUF324; SPTR: Uncharacterized protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; IMG reference gene:2505283506; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr4.
 
   
 0.799
cas2
CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
   
 0.796
AEH44109.1
InterPro IPR005537; KEGG: kol:Kole_0662 protein of unknown function DUF324; PFAM: protein of unknown function DUF324; SPTR: Putative uncharacterized protein; IMG reference gene:2505283508; PFAM: RAMP superfamily.
 
     0.784
cas1
CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
   
 0.776
AEH44106.1
KEGG: rrs:RoseRS_2590 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505283505.
 
   
 0.774
AEH44114.1
Metal dependent phosphohydrolase; COGs: COG1203 helicase; InterProIPR006674:IPR011545:IPR001650:IPR014021:IPR 006483:IPR006474:IPR003607:IPR014001; KEGG: dau:Daud_1813 metal dependent phosphohydrolase; PFAM: DEAD/DEAH box helicase domain protein; metal-dependent phosphohydrolase HD sub domain; helicase domain protein; SMART: DEAD-like helicase; metal-dependent phosphohydrolase HD region; helicase domain protein; SPTR: Metal dependent phosphohydrolase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; IMG reference gene:2505283513; PFAM: HD domain; DEAD/DEAH [...]
 
   
 0.734
AEH44102.1
CRISPR-associated RAMP protein, Cmr1 family; InterPro IPR007522; KEGG: pth:PTH_0707 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; IMG reference gene:2505283501; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr1.
       0.727
AEH44105.1
Domain of unknown function DUF1814; InterPro IPR014942; KEGG: pth:PTH_1920 hypothetical protein; PFAM: Domain of unknown function DUF1814; SPTR: Uncharacterized conserved protein; IMG reference gene:2505283504; PFAM: Domain of unknown function (DUF1814).
       0.726
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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