Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AEH44107.1CRISPR-associated RAMP protein, Cmr4 family; COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR013410; KEGG: pth:PTH_0712 hypothetical protein; PFAM: protein of unknown function DUF324; SPTR: Uncharacterized protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; IMG reference gene:2505283506; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr4. (370 aa)    
Predicted Functional Partners:
AEH44106.1
KEGG: rrs:RoseRS_2590 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505283505.
 
 
 
 0.975
AEH44102.1
CRISPR-associated RAMP protein, Cmr1 family; InterPro IPR007522; KEGG: pth:PTH_0707 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; IMG reference gene:2505283501; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr1.
 
 
 
 0.972
AEH44103.1
InterPro IPR005537; KEGG: adg:Adeg_0804 protein of unknown function DUF324; PFAM: protein of unknown function DUF324; SPTR: Putative uncharacterized protein; IMG reference gene:2505283502; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr6.
 
     0.946
AEH44108.1
KEGG: cli:Clim_0934 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505283507.
 
     0.946
AEH44109.1
InterPro IPR005537; KEGG: kol:Kole_0662 protein of unknown function DUF324; PFAM: protein of unknown function DUF324; SPTR: Putative uncharacterized protein; IMG reference gene:2505283508; PFAM: RAMP superfamily.
 
     0.945
AEH45207.1
CRISPR-associated RAMP protein, Cmr6 family; COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR010172:IPR005537; KEGG: sat:SYN_02247 putative cytoplasmic protein; PFAM: protein of unknown function DUF324; SPTR: Hypothetical cytosolic protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; IMG reference gene:2505284654; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr6.
 
 
 
 0.917
AEH45208.1
CRISPR-associated protein, Cmr5 family; InterPro IPR010160; KEGG: sat:SYN_02248 putative cytoplasmic protein; PFAM: CRISPR-associated protein TM1791.1; SPTR: Hypothetical cytosolic protein; TIGRFAM: CRISPR-associated protein, Cmr5 family; IMG reference gene:2505284655; PFAM: CRISPR-associated protein (Cas_Cmr5); TIGRFAM: CRISPR type III-B/RAMP module-associated protein Cmr5.
 
 
 
 0.868
AEH45213.1
CRISPR-associated protein, Crm2 family; COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs); InterPro IPR013407; KEGG: sat:SYN_02251 HD superfamily hydrolase; SPTR: Hydrolase of the HD superfamily; TIGRFAM: CRISPR-associated protein, Crm2 family; IMG reference gene:2505284660; PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B.
 
 
 
 0.824
AEH44101.1
CRISPR-associated protein Cas6; COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR002743:IPR010156; KEGG: rxy:Rxyl_0271 CRISPR-associated Cas6 family protein; PFAM: protein of unknown function DUF57; SPTR: CRISPR-associated protein, Cas6 family; TIGRFAM: CRISPR-associated protein Cas6; IMG reference gene:2505283500; PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6.
 
     0.795
AEH45214.1
CRISPR-associated RAMP protein, Cmr1 family; COGs: COG1367 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR007522:IPR005537; KEGG: app:CAP2UW1_2204 hypothetical protein; PFAM: protein of unknown function DUF324; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; IMG reference gene:2505284661; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr1.
 
 
 
 0.791
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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